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    Home » Recipes » Breakfast

    Ham Cheese & Egg Cups

    by Mindy Boyd · Published: May 8, 2024 · Updated: May 8, 2024

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    ⏲️ 25 minutes mins
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    Our delicious ham and cheese egg cups are the perfect savory breakfast option for busy mornings, ready in under 20 minutes! Packed with protein and healthy fats, these low carb delights are a fantastic way to start your day. They’re also perfect for feeding a crowd or to make ahead for meal prep. 

    We like to serve these eggs cups with a little bit of fresh fruit and toast, a biscuit, or English muffin for a healthy breakfast the whole family loves. 

    A turquoise twelve cup muffin tin filled with Baked Ham Cheese & Egg Breakfast Cups.
    Jump to:
    • Ingredient Notes
    • How to make ham cheese and egg muffin cups
    • Tips
    • Storage and reheating
    • Ham Cheese & Egg Breakfast Cups
    • More easy breakfast recipes…
    Three Baked Ham Cheese & Egg Breakfast Cups on a white plate.

    Why you’ll love this egg cups recipe

    • Perfect easy low-carb breakfast main dish.
    • Short prep and cooking time making them perfect for busy weekday mornings.
    • Eggs are healthy and nutritious!
    • A simple recipe that uses simple ingredients.
    • Making egg cups in a muffin tin is a great way to cook an entire dozen eggs at once.
    Very close up shot of one ham and cheese egg muffin in the muffin pan after it came out of the oven.

    Ingredients

    See recipe card for exact amounts.  

    A stack of sliced ham, a dozen eggs and small bowls of cheese, salt and pepper that are needed to make the recipe.

    Ingredient Notes

    slices of ham – we buy pre-sliced ham to make this as easy as possible, this would also be a great use for leftover ham.

    cheese – I use pre-shredded cheese, again to make this as easy as possible. 

    eggs – we use one dozen whole eggs, I always buy large eggs, but you could use whatever size you want. 

    seasonings – I like to season these simply with a little salt and black pepper. 

    ​cooking spray – we use canola oil or olive oil non-stick cooking spray, use whatever you have. 

    One ham, egg, and cheese cup that is cut open so the runny yolk is visible.

    How to make ham cheese and egg muffin cups

    1. Preheat the oven to 400° and spray the wells of a 12 cup muffin pan with non-stick spray.
    2. Place a slice of ham inside each of the wells of a muffin tin. 
    3. Divide the cheese between the 12 cups.
    4. Place an egg on top of the cheese, sprinkle with salt and pepper.
    5. Bake for 14-16 minutes or until the egg whites are cooked and the yolk is the desired doneness. 
    6. Remove the ham cups from the muffin tin with a butter knife or small spatula.  

    Recipe Note – While these egg bites are a great make ahead easy breakfast I find that they do require a fork and plate, so not quite grab-and-go. The ham is watery and some of the egg tends to go through to the cupcake tin. 

    A collage of three images showing the ham in the muffin tin, then topped with cheese, and then topped with an egg.

    Tips

    • Very thin ham slices will probably not work too well because they may not hold up. If your ham is very thin you may want to double up on the ham slices.
    • As you can see in the photo the ham doesn’t stay spread out very well so I crack the egg into a small bowl so I can use one hand to hold the ham open and the other to pour the egg out of the bowl.  The egg expands when it cooks and you are left with perfect little egg cups.
    • It may take a time or two making these to figure out exactly how long to bake them. I bake mine for 15 minutes and end up with partially runny egg yolks (see picture), bake yours until the white is set and the egg yolk is just how you like it.
    Several oven Baked Ham Cheese & Egg Breakfast Cups on a white plate.

    Variations

    This is a basic recipe that can be made just the way you like them. 

    • Any seasonings you want can be used, a little onion powder and garlic powder sprinkled on top would be a great addition. 
    • Use any cheese you like, cheddar cheese, pepper jack cheese, Monterey jack cheese, or even goat cheese or feta cheese are all delicious! 
    • A little hot sauce or crushed red pepper flakes are great options to give these a little kick.
    • For color and fresh taste top them off with a little fresh basil or fresh parsley. 
    • Top them with some chopped green onions. 

    Storage and reheating

    Store in an airtight container for 3-4 days. Warm in the microwave for 30-60 seconds, depending on your microwave and how hot you want them to be. 

    Close up of one egg cup in the muffin tin, the recipe title is a the top in text so the image can be saved on Pinterest.
    Close up view showing one baked ham and cheese egg cup in a turquoise muffin pan.

    Ham Cheese & Egg Breakfast Cups

    Mindy Boyd
    Our delicious ham and cheese egg cups are the perfect savory breakfast option for busy mornings, ready in under 20 minutes! Packed with protein and healthy fats, these low carb delights are a fantastic way to start your day.
    No ratings yet
    Print – Email Required Pin Recipe Save Recipe Saved Recipe
    Prep Time 10 minutes mins
    Cook Time 15 minutes mins
    Total Time 25 minutes mins
    Course Breakfast, Brunch
    Cuisine American
    Servings 12 servings

    Ingredients
      

    • 12 slices of ham
    • 3/4 cup shredded cheese
    • 12 eggs
    • salt to taste
    • pepper to taste
    • cooking spray
    Get Recipe Ingredients

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    Instructions
     

    • Preheat oven to 400° and spray the wells of a 12 cup muffin pan with non-stick spray.
      cooking spray
    • Line each muffin tin with a piece of ham.
      12 slices of ham
    • Divide the cheese between the 12 cups.
      3/4 cup shredded cheese
    • Crack open an egg into a small bowl and then pour it on top of the cheese, sprinkle with salt and pepper.
      12 eggs, salt, pepper
    • Bake for 14-16 minutes or until the egg whites are cooked and the yolk is the desired doneness. 
    • Remove the ham cups from the muffin tin with a butter knife or small spatula.  

    Notes

    Very thin ham slices will probably not work too well because they may not hold up. If your ham is very thin you may want to double up on the ham slices.
    As you can see in the photo the ham doesn’t stay spread out very well so I crack the egg into a small bowl so I can use one hand to hold the ham open and the other to pour the egg out of the bowl. The egg expands when it cooks and you are left with perfect little egg cups.
    It may take a time or two making these to figure out exactly how long to bake them. I bake mine for 15 minutes and end up with partially runny egg yolks (see picture), bake yours until the white is set and the egg yolk is just how you like it.
     
    Did you make this recipe? We would love it if you would leave us a comment and ⭐️⭐️⭐️⭐️⭐️ review below!
     
    Nutritional information is approximate. 
     
    See tips, notes, and suggestions in the post above.
     
    Bookmark this page to find it quickly when you are ready to make this recipe!

    Nutrition Facts

    Calories: 152kcal | Carbohydrates: 0.5g | Protein: 13g | Fat: 10g | Saturated Fat: 4g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 4g | Trans Fat: 0.02g | Cholesterol: 187mg | Sodium: 439mg | Potassium: 146mg | Sugar: 0.2g | Vitamin A: 285IU | Calcium: 62mg | Iron: 1mg
    Tried this recipe?Let us know how it was with a comment below.

    More easy breakfast recipes…

    Bacon Gravy (Country Gravy) only requires 5 ingredients. Bacon, fat, flour, milk, salt and pepper is all you need to make this classic comfort food!

    Bacon Gravy

    Only 5 ingredients is all you need to make this classic comfort food!

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    Copycat Cheese Eggs

    Cheese and eggs are cooked in melted butter and the end results is cheesy eggs that are so delicious! 

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    Chocolate Chip Baked Oatmeal

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